Cluster: Rep_3321_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3321
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3321_c_16 | Rep_3321_c_16_36 | 31513 | 32877 | - | GH1 |
| pfam | Rep_3321_c_16 | Rep_3321_c_16_37 | 33018 | 34448 | - | Gln-synt_C | Gln-synt_N |
| TC | Rep_3321_c_16 | Rep_3321_c_16_38 | 34560 | 36035 | - | 3.A.1.121.2 |
Gene ID: Rep_3321_c_16_36
Type: CAZyme
Location: 31513 - 32877 (-)
Type: CAZyme
Location: 31513 - 32877 (-)
Gene ID: Rep_3321_c_16_37
Type: pfam
Location: 33018 - 34448 (-)
Type: pfam
Location: 33018 - 34448 (-)
Gene ID: Rep_3321_c_16_38
Type: TC
Location: 34560 - 36035 (-)
Type: TC
Location: 34560 - 36035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.