Cluster: Rep_3305_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3305
- CGC Family ID: CGCFAM_01234
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3305_c_14 | Rep_3305_c_14_11 | 10354 | 12153 | + | GH127 |
| TF | Rep_3305_c_14 | Rep_3305_c_14_12 | 12357 | 12680 | + | GerE |
| TC | Rep_3305_c_14 | Rep_3305_c_14_13 | 12692 | 14029 | + | 3.A.5.1.1 |
Gene ID: Rep_3305_c_14_11
Type: CAZyme
Location: 10354 - 12153 (+)
Type: CAZyme
Location: 10354 - 12153 (+)
Gene ID: Rep_3305_c_14_12
Type: TF
Location: 12357 - 12680 (+)
Type: TF
Location: 12357 - 12680 (+)
Gene ID: Rep_3305_c_14_13
Type: TC
Location: 12692 - 14029 (+)
Type: TC
Location: 12692 - 14029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.