Cluster: Rep_3305_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3305
- CGC Family ID: CGCFAM_00018
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3305_c_11 | Rep_3305_c_11_19 | 18126 | 20018 | + | 9.B.18.1.3 |
| TC | Rep_3305_c_11 | Rep_3305_c_11_20 | 20037 | 21152 | + | 9.B.18.2.1 |
| pfam | Rep_3305_c_11 | Rep_3305_c_11_21 | 21171 | 22292 | + | Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C |
| pfam | Rep_3305_c_11 | Rep_3305_c_11_22 | 22319 | 23452 | + | Epimerase_2 |
| CAZyme | Rep_3305_c_11 | Rep_3305_c_11_23 | 23495 | 24583 | + | GT4 |
Gene ID: Rep_3305_c_11_19
Type: TC
Location: 18126 - 20018 (+)
Type: TC
Location: 18126 - 20018 (+)
Gene ID: Rep_3305_c_11_20
Type: TC
Location: 20037 - 21152 (+)
Type: TC
Location: 20037 - 21152 (+)
Gene ID: Rep_3305_c_11_21
Type: pfam
Location: 21171 - 22292 (+)
Type: pfam
Location: 21171 - 22292 (+)
Gene ID: Rep_3305_c_11_22
Type: pfam
Location: 22319 - 23452 (+)
Type: pfam
Location: 22319 - 23452 (+)
Gene ID: Rep_3305_c_11_23
Type: CAZyme
Location: 23495 - 24583 (+)
Type: CAZyme
Location: 23495 - 24583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.