Cluster: Rep_3305_CGC21
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3305
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3305_c_72 | Rep_3305_c_72_1 | 73 | 1125 | - | 2.A.20.1.7 |
| TF | Rep_3305_c_72 | Rep_3305_c_72_2 | 1381 | 1737 | + | HTH_5 |
| STP | Rep_3305_c_72 | Rep_3305_c_72_3 | 1762 | 1980 | + | HMA |
| TC | Rep_3305_c_72 | Rep_3305_c_72_4 | 1993 | 3849 | + | 3.A.3.6.10 |
| NULL(UNKNOWN) | Rep_3305_c_72 | Rep_3305_c_72_5 | 4104 | 4997 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3305_c_72 | Rep_3305_c_72_6 | 5338 | 7554 | - | GH141 |
| STP | Rep_3305_c_72 | Rep_3305_c_72_7 | 7635 | 7907 | - | PTS-HPr |
| TC | Rep_3305_c_72 | Rep_3305_c_72_8 | 8021 | 9046 | - | 1.A.33.1.5 |
Gene ID: Rep_3305_c_72_1
Type: TC
Location: 73 - 1125 (-)
Type: TC
Location: 73 - 1125 (-)
Gene ID: Rep_3305_c_72_2
Type: TF
Location: 1381 - 1737 (+)
Type: TF
Location: 1381 - 1737 (+)
Gene ID: Rep_3305_c_72_3
Type: STP
Location: 1762 - 1980 (+)
Type: STP
Location: 1762 - 1980 (+)
Gene ID: Rep_3305_c_72_4
Type: TC
Location: 1993 - 3849 (+)
Type: TC
Location: 1993 - 3849 (+)
Gene ID: Rep_3305_c_72_5
Type:
Location: 4104 - 4997 (+)
Type:
Location: 4104 - 4997 (+)
Gene ID: Rep_3305_c_72_6
Type: CAZyme
Location: 5338 - 7554 (-)
Type: CAZyme
Location: 5338 - 7554 (-)
Gene ID: Rep_3305_c_72_7
Type: STP
Location: 7635 - 7907 (-)
Type: STP
Location: 7635 - 7907 (-)
Gene ID: Rep_3305_c_72_8
Type: TC
Location: 8021 - 9046 (-)
Type: TC
Location: 8021 - 9046 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.