Cluster: Rep_3305_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3305
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3305_c_51 | Rep_3305_c_51_4 | 1306 | 2709 | - | 3.B.1.1.6 |
| TC | Rep_3305_c_51 | Rep_3305_c_51_5 | 2733 | 3920 | - | 3.B.1.1.3 |
| TC | Rep_3305_c_51 | Rep_3305_c_51_6 | 3936 | 4355 | - | 3.B.1.1.3 |
| pfam | Rep_3305_c_51 | Rep_3305_c_51_7 | 4400 | 4807 | - | OAD_gamma |
| TC | Rep_3305_c_51 | Rep_3305_c_51_8 | 4828 | 6273 | - | 3.B.1.1.5 |
| pfam | Rep_3305_c_51 | Rep_3305_c_51_9 | 6613 | 7308 | - | UPF0029 |
| CAZyme | Rep_3305_c_51 | Rep_3305_c_51_10 | 7436 | 8737 | + | GT76 |
| CAZyme | Rep_3305_c_51 | Rep_3305_c_51_11 | 8822 | 10693 | + | GH31_14 |
Gene ID: Rep_3305_c_51_4
Type: TC
Location: 1306 - 2709 (-)
Type: TC
Location: 1306 - 2709 (-)
Gene ID: Rep_3305_c_51_5
Type: TC
Location: 2733 - 3920 (-)
Type: TC
Location: 2733 - 3920 (-)
Gene ID: Rep_3305_c_51_6
Type: TC
Location: 3936 - 4355 (-)
Type: TC
Location: 3936 - 4355 (-)
Gene ID: Rep_3305_c_51_7
Type: pfam
Location: 4400 - 4807 (-)
Type: pfam
Location: 4400 - 4807 (-)
Gene ID: Rep_3305_c_51_8
Type: TC
Location: 4828 - 6273 (-)
Type: TC
Location: 4828 - 6273 (-)
Gene ID: Rep_3305_c_51_9
Type: pfam
Location: 6613 - 7308 (-)
Type: pfam
Location: 6613 - 7308 (-)
Gene ID: Rep_3305_c_51_10
Type: CAZyme
Location: 7436 - 8737 (+)
Type: CAZyme
Location: 7436 - 8737 (+)
Gene ID: Rep_3305_c_51_11
Type: CAZyme
Location: 8822 - 10693 (+)
Type: CAZyme
Location: 8822 - 10693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.