Cluster: Rep_3305_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3305
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3305_c_30 | Rep_3305_c_30_5 | 4161 | 5210 | + | GH177 |
| pfam | Rep_3305_c_30 | Rep_3305_c_30_6 | 5372 | 6667 | + | tRNA-synt_2b | Seryl_tRNA_N |
| TF | Rep_3305_c_30 | Rep_3305_c_30_7 | 6914 | 7147 | - | 0043707 |
| TC | Rep_3305_c_30 | Rep_3305_c_30_8 | 8004 | 8450 | - | 9.A.11.1.1 |
| TC | Rep_3305_c_30 | Rep_3305_c_30_9 | 8447 | 8869 | - | 9.A.11.1.1 |
Gene ID: Rep_3305_c_30_5
Type: CAZyme
Location: 4161 - 5210 (+)
Type: CAZyme
Location: 4161 - 5210 (+)
Gene ID: Rep_3305_c_30_6
Type: pfam
Location: 5372 - 6667 (+)
Type: pfam
Location: 5372 - 6667 (+)
Gene ID: Rep_3305_c_30_7
Type: TF
Location: 6914 - 7147 (-)
Type: TF
Location: 6914 - 7147 (-)
Gene ID: Rep_3305_c_30_8
Type: TC
Location: 8004 - 8450 (-)
Type: TC
Location: 8004 - 8450 (-)
Gene ID: Rep_3305_c_30_9
Type: TC
Location: 8447 - 8869 (-)
Type: TC
Location: 8447 - 8869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.