Cluster: Rep_3305_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3305
- CGC Family ID: CGCFAM_00977
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3305_c_19 | Rep_3305_c_19_7 | 7908 | 8954 | - | GH179 |
| TC | Rep_3305_c_19 | Rep_3305_c_19_8 | 9492 | 10379 | + | 9.B.70.1.1 |
| pfam | Rep_3305_c_19 | Rep_3305_c_19_9 | 10379 | 10879 | + | Spore_III_AB |
| pfam | Rep_3305_c_19 | Rep_3305_c_19_10 | 10910 | 11107 | + | SpoIIIAC |
| TC | Rep_3305_c_19 | Rep_3305_c_19_11 | 11117 | 11503 | + | 9.B.70.1.1 |
Gene ID: Rep_3305_c_19_7
Type: CAZyme
Location: 7908 - 8954 (-)
Type: CAZyme
Location: 7908 - 8954 (-)
Gene ID: Rep_3305_c_19_8
Type: TC
Location: 9492 - 10379 (+)
Type: TC
Location: 9492 - 10379 (+)
Gene ID: Rep_3305_c_19_9
Type: pfam
Location: 10379 - 10879 (+)
Type: pfam
Location: 10379 - 10879 (+)
Gene ID: Rep_3305_c_19_10
Type: pfam
Location: 10910 - 11107 (+)
Type: pfam
Location: 10910 - 11107 (+)
Gene ID: Rep_3305_c_19_11
Type: TC
Location: 11117 - 11503 (+)
Type: TC
Location: 11117 - 11503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.