Cluster: Rep_3305_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3305
- CGC Family ID: CGCFAM_00013
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3305_c_18 | Rep_3305_c_18_10 | 8790 | 10067 | - | GH109 |
| pfam | Rep_3305_c_18 | Rep_3305_c_18_11 | 10238 | 10957 | - | POTRA_1 |
| STP | Rep_3305_c_18 | Rep_3305_c_18_12 | 10981 | 12249 | - | EPSP_synthase |
| TC | Rep_3305_c_18 | Rep_3305_c_18_13 | 12314 | 13393 | - | 2.A.103.1.3 |
| pfam | Rep_3305_c_18 | Rep_3305_c_18_14 | 13489 | 14841 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_3305_c_18 | Rep_3305_c_18_15 | 14866 | 15870 | - | 9.B.146.1.3 |
Gene ID: Rep_3305_c_18_10
Type: CAZyme
Location: 8790 - 10067 (-)
Type: CAZyme
Location: 8790 - 10067 (-)
Gene ID: Rep_3305_c_18_11
Type: pfam
Location: 10238 - 10957 (-)
Type: pfam
Location: 10238 - 10957 (-)
Gene ID: Rep_3305_c_18_12
Type: STP
Location: 10981 - 12249 (-)
Type: STP
Location: 10981 - 12249 (-)
Gene ID: Rep_3305_c_18_13
Type: TC
Location: 12314 - 13393 (-)
Type: TC
Location: 12314 - 13393 (-)
Gene ID: Rep_3305_c_18_14
Type: pfam
Location: 13489 - 14841 (-)
Type: pfam
Location: 13489 - 14841 (-)
Gene ID: Rep_3305_c_18_15
Type: TC
Location: 14866 - 15870 (-)
Type: TC
Location: 14866 - 15870 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11327
Family
HGM11327
Genus
HGM11327
Species
HGM11327 sp900759935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.