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Cluster: Rep_3305_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3305_c_0 Rep_3305_c_0_35 28458 29396 + 3.A.1.34.1
TC Rep_3305_c_0 Rep_3305_c_0_36 29389 30162 + 3.A.1.34.1
peptidase Rep_3305_c_0 Rep_3305_c_0_37 30361 32163 + M03.UPB
NULL(UNKNOWN) Rep_3305_c_0 Rep_3305_c_0_38 32279 33097 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3305_c_0 Rep_3305_c_0_39 33160 34290 - 8.A.5.1.4
pfam Rep_3305_c_0 Rep_3305_c_0_40 34541 35953 + CN_hydrolase | NAD_synthase
NULL(UNKNOWN) Rep_3305_c_0 Rep_3305_c_0_41 35934 36458 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3305_c_0 Rep_3305_c_0_42 36537 37511 - GT2
CAZyme Rep_3305_c_0 Rep_3305_c_0_43 37552 38649 - GT2
CAZyme Rep_3305_c_0 Rep_3305_c_0_44 38656 39447 - GT32
TC Rep_3305_c_0 Rep_3305_c_0_45 39459 40769 - 3.A.1.103.5
TC Rep_3305_c_0 Rep_3305_c_0_46 40780 41646 - 3.A.1.103.5
CAZyme Rep_3305_c_0 Rep_3305_c_0_47 41721 42638 - GT2
CAZyme Rep_3305_c_0 Rep_3305_c_0_48 42693 43670 - GT2
CAZyme Rep_3305_c_0 Rep_3305_c_0_49 43687 44688 - GT2
CAZyme Rep_3305_c_0 Rep_3305_c_0_50 44685 45797 - GT4
CAZyme Rep_3305_c_0 Rep_3305_c_0_51 45794 46633 - GT2
pfam Rep_3305_c_0 Rep_3305_c_0_52 46636 47745 - EpsG
CAZyme Rep_3305_c_0 Rep_3305_c_0_53 47794 49614 - GT4
TC Rep_3305_c_0 Rep_3305_c_0_54 49647 51497 - 9.B.18.2.1
Gene ID: Rep_3305_c_0_35
Type: TC
Location: 28458 - 29396 (+)
Gene ID: Rep_3305_c_0_36
Type: TC
Location: 29389 - 30162 (+)
Gene ID: Rep_3305_c_0_37
Type: peptidase
Location: 30361 - 32163 (+)
Gene ID: Rep_3305_c_0_38
Type:
Location: 32279 - 33097 (-)
Gene ID: Rep_3305_c_0_39
Type: TC
Location: 33160 - 34290 (-)
Gene ID: Rep_3305_c_0_40
Type: pfam
Location: 34541 - 35953 (+)
Gene ID: Rep_3305_c_0_41
Type:
Location: 35934 - 36458 (+)
Gene ID: Rep_3305_c_0_42
Type: CAZyme
Location: 36537 - 37511 (-)
Gene ID: Rep_3305_c_0_43
Type: CAZyme
Location: 37552 - 38649 (-)
Gene ID: Rep_3305_c_0_44
Type: CAZyme
Location: 38656 - 39447 (-)
Gene ID: Rep_3305_c_0_45
Type: TC
Location: 39459 - 40769 (-)
Gene ID: Rep_3305_c_0_46
Type: TC
Location: 40780 - 41646 (-)
Gene ID: Rep_3305_c_0_47
Type: CAZyme
Location: 41721 - 42638 (-)
Gene ID: Rep_3305_c_0_48
Type: CAZyme
Location: 42693 - 43670 (-)
Gene ID: Rep_3305_c_0_49
Type: CAZyme
Location: 43687 - 44688 (-)
Gene ID: Rep_3305_c_0_50
Type: CAZyme
Location: 44685 - 45797 (-)
Gene ID: Rep_3305_c_0_51
Type: CAZyme
Location: 45794 - 46633 (-)
Gene ID: Rep_3305_c_0_52
Type: pfam
Location: 46636 - 47745 (-)
Gene ID: Rep_3305_c_0_53
Type: CAZyme
Location: 47794 - 49614 (-)
Gene ID: Rep_3305_c_0_54
Type: TC
Location: 49647 - 51497 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
HGM11327
→
Family
HGM11327
→
Genus
HGM11327
→
Species
HGM11327 sp900759935

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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