Cluster: Rep_3303_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3303
- CGC Family ID: CGCFAM_07788
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3303_c_98 | Rep_3303_c_98_14 | 16206 | 17300 | - | 2.A.21.9.2 |
| TF | Rep_3303_c_98 | Rep_3303_c_98_15 | 17293 | 17982 | - | Trans_reg_C |
| CAZyme | Rep_3303_c_98 | Rep_3303_c_98_16 | 18080 | 20467 | - | GH3 |
Gene ID: Rep_3303_c_98_14
Type: TC
Location: 16206 - 17300 (-)
Type: TC
Location: 16206 - 17300 (-)
Gene ID: Rep_3303_c_98_15
Type: TF
Location: 17293 - 17982 (-)
Type: TF
Location: 17293 - 17982 (-)
Gene ID: Rep_3303_c_98_16
Type: CAZyme
Location: 18080 - 20467 (-)
Type: CAZyme
Location: 18080 - 20467 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp002320035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.