Cluster: Rep_3303_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3303_c_125 | Rep_3303_c_125_7 | 6004 | 6486 | - | 3.A.2.2.2 |
| TC | Rep_3303_c_125 | Rep_3303_c_125_8 | 6502 | 8451 | - | 3.A.2.2.2 |
| NULL(UNKNOWN) | Rep_3303_c_125 | Rep_3303_c_125_9 | 8453 | 8767 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3303_c_125 | Rep_3303_c_125_10 | 9157 | 10509 | + | GT76 |
Gene ID: Rep_3303_c_125_7
Type: TC
Location: 6004 - 6486 (-)
Type: TC
Location: 6004 - 6486 (-)
Gene ID: Rep_3303_c_125_8
Type: TC
Location: 6502 - 8451 (-)
Type: TC
Location: 6502 - 8451 (-)
Gene ID: Rep_3303_c_125_9
Type:
Location: 8453 - 8767 (-)
Type:
Location: 8453 - 8767 (-)
Gene ID: Rep_3303_c_125_10
Type: CAZyme
Location: 9157 - 10509 (+)
Type: CAZyme
Location: 9157 - 10509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp002320035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.