Cluster: Rep_3303_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3303_c_118 | Rep_3303_c_118_11 | 11419 | 13338 | + | 9.B.18.2.1 |
| STP | Rep_3303_c_118 | Rep_3303_c_118_12 | 13382 | 14587 | + | Aminotran_1_2 |
| TC | Rep_3303_c_118 | Rep_3303_c_118_13 | 14591 | 15289 | + | 9.B.18.1.3 |
| CAZyme | Rep_3303_c_118 | Rep_3303_c_118_14 | 15303 | 16574 | + | GT4 |
Gene ID: Rep_3303_c_118_11
Type: TC
Location: 11419 - 13338 (+)
Type: TC
Location: 11419 - 13338 (+)
Gene ID: Rep_3303_c_118_12
Type: STP
Location: 13382 - 14587 (+)
Type: STP
Location: 13382 - 14587 (+)
Gene ID: Rep_3303_c_118_13
Type: TC
Location: 14591 - 15289 (+)
Type: TC
Location: 14591 - 15289 (+)
Gene ID: Rep_3303_c_118_14
Type: CAZyme
Location: 15303 - 16574 (+)
Type: CAZyme
Location: 15303 - 16574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp002320035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.