Cluster: Rep_3303_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3303
- CGC Family ID: CGCFAM_03546
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3303_c_1 | Rep_3303_c_1_3 | 3329 | 4096 | - | CE4 |
| pfam | Rep_3303_c_1 | Rep_3303_c_1_4 | 4230 | 4970 | + | DUF364 | DUF4213 |
| TC | Rep_3303_c_1 | Rep_3303_c_1_5 | 5095 | 5421 | - | 2.A.78.1.1 |
| TC | Rep_3303_c_1 | Rep_3303_c_1_6 | 5418 | 6128 | - | 2.A.78.1.1 |
Gene ID: Rep_3303_c_1_3
Type: CAZyme
Location: 3329 - 4096 (-)
Type: CAZyme
Location: 3329 - 4096 (-)
Gene ID: Rep_3303_c_1_4
Type: pfam
Location: 4230 - 4970 (+)
Type: pfam
Location: 4230 - 4970 (+)
Gene ID: Rep_3303_c_1_5
Type: TC
Location: 5095 - 5421 (-)
Type: TC
Location: 5095 - 5421 (-)
Gene ID: Rep_3303_c_1_6
Type: TC
Location: 5418 - 6128 (-)
Type: TC
Location: 5418 - 6128 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp002320035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.