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Cluster: Rep_3294_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3294_c_40 Rep_3294_c_40_9 12900 14465 + 2.A.66.4.7
TC Rep_3294_c_40 Rep_3294_c_40_10 14469 15917 + 9.B.67.1.1
CAZyme Rep_3294_c_40 Rep_3294_c_40_11 15914 17044 + GT4
pfam Rep_3294_c_40 Rep_3294_c_40_12 17031 17534 + DUF4330
pfam Rep_3294_c_40 Rep_3294_c_40_13 17531 18043 + DUF4330
CAZyme Rep_3294_c_40 Rep_3294_c_40_14 18051 20261 + GT4
NULL(UNKNOWN) Rep_3294_c_40 Rep_3294_c_40_15 20761 20892 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3294_c_40 Rep_3294_c_40_16 21204 22925 + 3.B.1.1.6
Gene ID: Rep_3294_c_40_9
Type: TC
Location: 12900 - 14465 (+)
Gene ID: Rep_3294_c_40_10
Type: TC
Location: 14469 - 15917 (+)
Gene ID: Rep_3294_c_40_11
Type: CAZyme
Location: 15914 - 17044 (+)
Gene ID: Rep_3294_c_40_12
Type: pfam
Location: 17031 - 17534 (+)
Gene ID: Rep_3294_c_40_13
Type: pfam
Location: 17531 - 18043 (+)
Gene ID: Rep_3294_c_40_14
Type: CAZyme
Location: 18051 - 20261 (+)
Gene ID: Rep_3294_c_40_15
Type:
Location: 20761 - 20892 (+)
Gene ID: Rep_3294_c_40_16
Type: TC
Location: 21204 - 22925 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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