dbCAN Logo

Cluster: Rep_3294_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3294_c_14 Rep_3294_c_14_1 1072 2490 - 2.A.25.1.5
CAZyme Rep_3294_c_14 Rep_3294_c_14_2 2736 3491 + CE4
TF Rep_3294_c_14 Rep_3294_c_14_3 3561 4304 - MerR
TC Rep_3294_c_14 Rep_3294_c_14_4 4485 5897 + 2.A.118.1.4
peptidase Rep_3294_c_14 Rep_3294_c_14_5 6016 7149 + M38.UNW
TC Rep_3294_c_14 Rep_3294_c_14_6 7190 8584 + 2.A.118.1.4
pfam Rep_3294_c_14 Rep_3294_c_14_7 8729 9166 - LacAB_rpiB
CAZyme Rep_3294_c_14 Rep_3294_c_14_8 9339 11774 - GT35
CAZyme Rep_3294_c_14 Rep_3294_c_14_9 12108 13544 - GT5
pfam Rep_3294_c_14 Rep_3294_c_14_10 13630 14742 - NTP_transferase | Hexapep_GlmU
pfam Rep_3294_c_14 Rep_3294_c_14_11 14739 15953 - NTP_transferase | Hexapep_GlmU
CAZyme Rep_3294_c_14 Rep_3294_c_14_12 16016 18076 - CBM48 | GH13_9
Gene ID: Rep_3294_c_14_1
Type: TC
Location: 1072 - 2490 (-)
Gene ID: Rep_3294_c_14_2
Type: CAZyme
Location: 2736 - 3491 (+)
Gene ID: Rep_3294_c_14_3
Type: TF
Location: 3561 - 4304 (-)
Gene ID: Rep_3294_c_14_4
Type: TC
Location: 4485 - 5897 (+)
Gene ID: Rep_3294_c_14_5
Type: peptidase
Location: 6016 - 7149 (+)
Gene ID: Rep_3294_c_14_6
Type: TC
Location: 7190 - 8584 (+)
Gene ID: Rep_3294_c_14_7
Type: pfam
Location: 8729 - 9166 (-)
Gene ID: Rep_3294_c_14_8
Type: CAZyme
Location: 9339 - 11774 (-)
Gene ID: Rep_3294_c_14_9
Type: CAZyme
Location: 12108 - 13544 (-)
Gene ID: Rep_3294_c_14_10
Type: pfam
Location: 13630 - 14742 (-)
Gene ID: Rep_3294_c_14_11
Type: pfam
Location: 14739 - 15953 (-)
Gene ID: Rep_3294_c_14_12
Type: CAZyme
Location: 16016 - 18076 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List