Cluster: Rep_3294_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3294
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3294_c_11 | Rep_3294_c_11_57 | 54225 | 55469 | - | GT2 |
| TC | Rep_3294_c_11 | Rep_3294_c_11_58 | 55748 | 56860 | + | 3.A.1.12.4 |
| TC | Rep_3294_c_11 | Rep_3294_c_11_59 | 56867 | 57493 | + | 3.A.1.12.4 |
| TC | Rep_3294_c_11 | Rep_3294_c_11_60 | 57490 | 59025 | + | 3.A.1.12.14 |
Gene ID: Rep_3294_c_11_57
Type: CAZyme
Location: 54225 - 55469 (-)
Type: CAZyme
Location: 54225 - 55469 (-)
Gene ID: Rep_3294_c_11_58
Type: TC
Location: 55748 - 56860 (+)
Type: TC
Location: 55748 - 56860 (+)
Gene ID: Rep_3294_c_11_59
Type: TC
Location: 56867 - 57493 (+)
Type: TC
Location: 56867 - 57493 (+)
Gene ID: Rep_3294_c_11_60
Type: TC
Location: 57490 - 59025 (+)
Type: TC
Location: 57490 - 59025 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902363045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.