Cluster: Rep_3294_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3294
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3294_c_47 | Rep_3294_c_47_11 | 9001 | 10287 | + | GT2 |
| TF | Rep_3294_c_47 | Rep_3294_c_47_12 | 10550 | 11272 | + | GntR |
| pfam | Rep_3294_c_47 | Rep_3294_c_47_13 | 11477 | 12517 | + | ADH_zinc_N | 3HCDH_N | ADH_N |
| TC | Rep_3294_c_47 | Rep_3294_c_47_14 | 12605 | 13627 | + | 2.A.56.1.3 |
| TC | Rep_3294_c_47 | Rep_3294_c_47_15 | 13696 | 14268 | + | 2.A.56.1.9 |
| TC | Rep_3294_c_47 | Rep_3294_c_47_16 | 14265 | 15563 | + | 2.A.56.1.9 |
Gene ID: Rep_3294_c_47_11
Type: CAZyme
Location: 9001 - 10287 (+)
Type: CAZyme
Location: 9001 - 10287 (+)
Gene ID: Rep_3294_c_47_12
Type: TF
Location: 10550 - 11272 (+)
Type: TF
Location: 10550 - 11272 (+)
Gene ID: Rep_3294_c_47_13
Type: pfam
Location: 11477 - 12517 (+)
Type: pfam
Location: 11477 - 12517 (+)
Gene ID: Rep_3294_c_47_14
Type: TC
Location: 12605 - 13627 (+)
Type: TC
Location: 12605 - 13627 (+)
Gene ID: Rep_3294_c_47_15
Type: TC
Location: 13696 - 14268 (+)
Type: TC
Location: 13696 - 14268 (+)
Gene ID: Rep_3294_c_47_16
Type: TC
Location: 14265 - 15563 (+)
Type: TC
Location: 14265 - 15563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902363045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.