Cluster: Rep_3293_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3293
- CGC Family ID: CGCFAM_10155
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3293_c_21 | Rep_3293_c_21_6 | 5740 | 7038 | - | 2.A.56.1.9 |
| TC | Rep_3293_c_21 | Rep_3293_c_21_7 | 7035 | 7607 | - | 2.A.56.1.9 |
| TC | Rep_3293_c_21 | Rep_3293_c_21_8 | 7676 | 8692 | - | 2.A.56.1.3 |
| pfam | Rep_3293_c_21 | Rep_3293_c_21_9 | 8779 | 9819 | - | ADH_zinc_N | AlaDh_PNT_C | 3HCDH_N | ADH_N |
| TF | Rep_3293_c_21 | Rep_3293_c_21_10 | 10065 | 10742 | - | GntR |
| CAZyme | Rep_3293_c_21 | Rep_3293_c_21_11 | 11003 | 12289 | - | GT2 |
Gene ID: Rep_3293_c_21_6
Type: TC
Location: 5740 - 7038 (-)
Type: TC
Location: 5740 - 7038 (-)
Gene ID: Rep_3293_c_21_7
Type: TC
Location: 7035 - 7607 (-)
Type: TC
Location: 7035 - 7607 (-)
Gene ID: Rep_3293_c_21_8
Type: TC
Location: 7676 - 8692 (-)
Type: TC
Location: 7676 - 8692 (-)
Gene ID: Rep_3293_c_21_9
Type: pfam
Location: 8779 - 9819 (-)
Type: pfam
Location: 8779 - 9819 (-)
Gene ID: Rep_3293_c_21_10
Type: TF
Location: 10065 - 10742 (-)
Type: TF
Location: 10065 - 10742 (-)
Gene ID: Rep_3293_c_21_11
Type: CAZyme
Location: 11003 - 12289 (-)
Type: CAZyme
Location: 11003 - 12289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900754605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.