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Cluster: Rep_3293_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3293_c_8 Rep_3293_c_8_20 23569 24690 + GT4
NULL(UNKNOWN) Rep_3293_c_8 Rep_3293_c_8_21 24739 26292 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3293_c_8 Rep_3293_c_8_22 26323 27402 + GH177
peptidase Rep_3293_c_8 Rep_3293_c_8_23 27484 29412 + C44.UNW
pfam Rep_3293_c_8 Rep_3293_c_8_24 29548 30336 + ABC2_membrane
TC Rep_3293_c_8 Rep_3293_c_8_25 30353 32305 + 3.A.1.103.5
pfam Rep_3293_c_8 Rep_3293_c_8_26 32302 34755 + Methyltransf_11 | Methyltransf_25
CAZyme Rep_3293_c_8 Rep_3293_c_8_27 34752 36458 + GT4
NULL(UNKNOWN) Rep_3293_c_8 Rep_3293_c_8_28 37151 37438 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_3293_c_8 Rep_3293_c_8_29 37529 39439 + C44.UPW
TC Rep_3293_c_8 Rep_3293_c_8_30 40114 42009 + 9.B.18.2.1
Gene ID: Rep_3293_c_8_20
Type: CAZyme
Location: 23569 - 24690 (+)
Gene ID: Rep_3293_c_8_21
Type:
Location: 24739 - 26292 (+)
Gene ID: Rep_3293_c_8_22
Type: CAZyme
Location: 26323 - 27402 (+)
Gene ID: Rep_3293_c_8_23
Type: peptidase
Location: 27484 - 29412 (+)
Gene ID: Rep_3293_c_8_24
Type: pfam
Location: 29548 - 30336 (+)
Gene ID: Rep_3293_c_8_25
Type: TC
Location: 30353 - 32305 (+)
Gene ID: Rep_3293_c_8_26
Type: pfam
Location: 32302 - 34755 (+)
Gene ID: Rep_3293_c_8_27
Type: CAZyme
Location: 34752 - 36458 (+)
Gene ID: Rep_3293_c_8_28
Type:
Location: 37151 - 37438 (+)
Gene ID: Rep_3293_c_8_29
Type: peptidase
Location: 37529 - 39439 (+)
Gene ID: Rep_3293_c_8_30
Type: TC
Location: 40114 - 42009 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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