Cluster: Rep_3293_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3293
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3293_c_4 | Rep_3293_c_4_28 | 29916 | 30944 | + | GT2 |
| pfam | Rep_3293_c_4 | Rep_3293_c_4_29 | 31116 | 32561 | + | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | Rep_3293_c_4 | Rep_3293_c_4_30 | 32628 | 33527 | - | 2.A.66.1.32 |
Gene ID: Rep_3293_c_4_28
Type: CAZyme
Location: 29916 - 30944 (+)
Type: CAZyme
Location: 29916 - 30944 (+)
Gene ID: Rep_3293_c_4_29
Type: pfam
Location: 31116 - 32561 (+)
Type: pfam
Location: 31116 - 32561 (+)
Gene ID: Rep_3293_c_4_30
Type: TC
Location: 32628 - 33527 (-)
Type: TC
Location: 32628 - 33527 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900754605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.