Cluster: Rep_3293_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3293
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3293_c_44 | Rep_3293_c_44_1 | 2 | 1777 | + | 3.A.16.1.3 |
| CAZyme | Rep_3293_c_44 | Rep_3293_c_44_2 | 1996 | 3435 | - | GH77 |
| peptidase | Rep_3293_c_44 | Rep_3293_c_44_3 | 3585 | 4514 | - | S09.UPW |
| STP | Rep_3293_c_44 | Rep_3293_c_44_4 | 4593 | 4763 | - | Fer4 | Fer4 |
| TC | Rep_3293_c_44 | Rep_3293_c_44_5 | 4944 | 7370 | + | 3.A.9.1.2 |
| TC | Rep_3293_c_44 | Rep_3293_c_44_6 | 7522 | 8241 | + | 1.C.113.1.3 |
Gene ID: Rep_3293_c_44_1
Type: TC
Location: 2 - 1777 (+)
Type: TC
Location: 2 - 1777 (+)
Gene ID: Rep_3293_c_44_2
Type: CAZyme
Location: 1996 - 3435 (-)
Type: CAZyme
Location: 1996 - 3435 (-)
Gene ID: Rep_3293_c_44_3
Type: peptidase
Location: 3585 - 4514 (-)
Type: peptidase
Location: 3585 - 4514 (-)
Gene ID: Rep_3293_c_44_4
Type: STP
Location: 4593 - 4763 (-)
Type: STP
Location: 4593 - 4763 (-)
Gene ID: Rep_3293_c_44_5
Type: TC
Location: 4944 - 7370 (+)
Type: TC
Location: 4944 - 7370 (+)
Gene ID: Rep_3293_c_44_6
Type: TC
Location: 7522 - 8241 (+)
Type: TC
Location: 7522 - 8241 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900754605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.