Cluster: Rep_3284_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3284
- CGC Family ID: CGCFAM_00592
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3284_c_7 | Rep_3284_c_7_59 | 62036 | 64918 | + | GH3 |
| CAZyme | Rep_3284_c_7 | Rep_3284_c_7_60 | 65024 | 67444 | + | GH3 |
| NULL(UNKNOWN) | Rep_3284_c_7 | Rep_3284_c_7_61 | 67441 | 67995 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3284_c_7 | Rep_3284_c_7_62 | 68236 | 69441 | + | ANF_receptor | Peripla_BP_5 | Peripla_BP_6 |
| TC | Rep_3284_c_7 | Rep_3284_c_7_63 | 69600 | 70484 | + | 3.A.1.4.10 |
| TC | Rep_3284_c_7 | Rep_3284_c_7_64 | 70497 | 71360 | + | 3.A.1.4.8 |
Gene ID: Rep_3284_c_7_59
Type: CAZyme
Location: 62036 - 64918 (+)
Type: CAZyme
Location: 62036 - 64918 (+)
Gene ID: Rep_3284_c_7_60
Type: CAZyme
Location: 65024 - 67444 (+)
Type: CAZyme
Location: 65024 - 67444 (+)
Gene ID: Rep_3284_c_7_61
Type:
Location: 67441 - 67995 (+)
Type:
Location: 67441 - 67995 (+)
Gene ID: Rep_3284_c_7_62
Type: pfam
Location: 68236 - 69441 (+)
Type: pfam
Location: 68236 - 69441 (+)
Gene ID: Rep_3284_c_7_63
Type: TC
Location: 69600 - 70484 (+)
Type: TC
Location: 69600 - 70484 (+)
Gene ID: Rep_3284_c_7_64
Type: TC
Location: 70497 - 71360 (+)
Type: TC
Location: 70497 - 71360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902497145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3284_c_7_60 | vegan > omnivore | 1.15915 | 0.01287 |