Cluster: Rep_3284_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3284
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3284_c_6 | Rep_3284_c_6_26 | 30591 | 31031 | + | 9.A.11.1.1 |
| CAZyme | Rep_3284_c_6 | Rep_3284_c_6_27 | 31136 | 32449 | + | GH13_20 |
| TF | Rep_3284_c_6 | Rep_3284_c_6_28 | 32569 | 32853 | + | HTH_5 |
| TC | Rep_3284_c_6 | Rep_3284_c_6_29 | 32853 | 33845 | + | 2.A.119.1.3 |
Gene ID: Rep_3284_c_6_26
Type: TC
Location: 30591 - 31031 (+)
Type: TC
Location: 30591 - 31031 (+)
Gene ID: Rep_3284_c_6_27
Type: CAZyme
Location: 31136 - 32449 (+)
Type: CAZyme
Location: 31136 - 32449 (+)
Gene ID: Rep_3284_c_6_28
Type: TF
Location: 32569 - 32853 (+)
Type: TF
Location: 32569 - 32853 (+)
Gene ID: Rep_3284_c_6_29
Type: TC
Location: 32853 - 33845 (+)
Type: TC
Location: 32853 - 33845 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902497145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3284_c_6_27 | vegan > omnivore | 1.02535 | 0.01287 |