Cluster: Rep_3284_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3284
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3284_c_6 | Rep_3284_c_6_5 | 5493 | 7805 | + | GH13_4 |
| TF | Rep_3284_c_6 | Rep_3284_c_6_6 | 7834 | 8820 | + | LacI |
| peptidase | Rep_3284_c_6 | Rep_3284_c_6_7 | 8922 | 9857 | + | S09.UPW |
| CAZyme | Rep_3284_c_6 | Rep_3284_c_6_8 | 9955 | 11394 | + | GH77 |
| TC | Rep_3284_c_6 | Rep_3284_c_6_9 | 11479 | 13677 | - | 3.A.16.1.2 |
Gene ID: Rep_3284_c_6_5
Type: CAZyme
Location: 5493 - 7805 (+)
Type: CAZyme
Location: 5493 - 7805 (+)
Gene ID: Rep_3284_c_6_6
Type: TF
Location: 7834 - 8820 (+)
Type: TF
Location: 7834 - 8820 (+)
Gene ID: Rep_3284_c_6_7
Type: peptidase
Location: 8922 - 9857 (+)
Type: peptidase
Location: 8922 - 9857 (+)
Gene ID: Rep_3284_c_6_8
Type: CAZyme
Location: 9955 - 11394 (+)
Type: CAZyme
Location: 9955 - 11394 (+)
Gene ID: Rep_3284_c_6_9
Type: TC
Location: 11479 - 13677 (-)
Type: TC
Location: 11479 - 13677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902497145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3284_c_6_5 | vegan > omnivore | 1.57955 | 0.01287 |