Cluster: Rep_3284_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: Rep_3284
- CGC Family ID: CGCFAM_00035
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3284_c_34 | Rep_3284_c_34_2 | 1728 | 2759 | + | 2.A.98.1.4 |
| STP | Rep_3284_c_34 | Rep_3284_c_34_3 | 2814 | 3710 | + | Pyr_redox_2 |
| STP | Rep_3284_c_34 | Rep_3284_c_34_4 | 3910 | 4890 | - | PfkB |
| CAZyme | Rep_3284_c_34 | Rep_3284_c_34_5 | 4887 | 6371 | - | GH32 |
| STP | Rep_3284_c_34 | Rep_3284_c_34_6 | 6408 | 8099 | - | SBP_bac_1 |
| TC | Rep_3284_c_34 | Rep_3284_c_34_7 | 8116 | 9003 | - | 3.A.1.1.29 |
| TC | Rep_3284_c_34 | Rep_3284_c_34_8 | 9018 | 9956 | - | 3.A.1.1.10 |
Gene ID: Rep_3284_c_34_2
Type: TC
Location: 1728 - 2759 (+)
Type: TC
Location: 1728 - 2759 (+)
Gene ID: Rep_3284_c_34_3
Type: STP
Location: 2814 - 3710 (+)
Type: STP
Location: 2814 - 3710 (+)
Gene ID: Rep_3284_c_34_4
Type: STP
Location: 3910 - 4890 (-)
Type: STP
Location: 3910 - 4890 (-)
Gene ID: Rep_3284_c_34_5
Type: CAZyme
Location: 4887 - 6371 (-)
Type: CAZyme
Location: 4887 - 6371 (-)
Gene ID: Rep_3284_c_34_6
Type: STP
Location: 6408 - 8099 (-)
Type: STP
Location: 6408 - 8099 (-)
Gene ID: Rep_3284_c_34_7
Type: TC
Location: 8116 - 9003 (-)
Type: TC
Location: 8116 - 9003 (-)
Gene ID: Rep_3284_c_34_8
Type: TC
Location: 9018 - 9956 (-)
Type: TC
Location: 9018 - 9956 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902497145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.