Cluster: Rep_3284_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3284
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3284_c_21 | Rep_3284_c_21_7 | 7734 | 9086 | + | 1.A.26.1.2 |
| NULL(UNKNOWN) | Rep_3284_c_21 | Rep_3284_c_21_8 | 9150 | 9344 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3284_c_21 | Rep_3284_c_21_9 | 9971 | 11254 | + | GT2 |
| TF | Rep_3284_c_21 | Rep_3284_c_21_10 | 11504 | 12292 | - | HTH_DeoR |
| TC | Rep_3284_c_21 | Rep_3284_c_21_11 | 12675 | 13784 | + | 9.A.28.1.1 |
Gene ID: Rep_3284_c_21_7
Type: TC
Location: 7734 - 9086 (+)
Type: TC
Location: 7734 - 9086 (+)
Gene ID: Rep_3284_c_21_8
Type:
Location: 9150 - 9344 (-)
Type:
Location: 9150 - 9344 (-)
Gene ID: Rep_3284_c_21_9
Type: CAZyme
Location: 9971 - 11254 (+)
Type: CAZyme
Location: 9971 - 11254 (+)
Gene ID: Rep_3284_c_21_10
Type: TF
Location: 11504 - 12292 (-)
Type: TF
Location: 11504 - 12292 (-)
Gene ID: Rep_3284_c_21_11
Type: TC
Location: 12675 - 13784 (+)
Type: TC
Location: 12675 - 13784 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp902497145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.