Cluster: Rep_3277_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3277
- CGC Family ID: CGCFAM_00003
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3277_c_3 | Rep_3277_c_3_113 | 116730 | 120080 | - | GT2 |
| CAZyme | Rep_3277_c_3 | Rep_3277_c_3_114 | 120098 | 121189 | - | GT4 |
| TC | Rep_3277_c_3 | Rep_3277_c_3_115 | 121186 | 121911 | - | 3.A.1.103.1 |
| pfam | Rep_3277_c_3 | Rep_3277_c_3_116 | 121921 | 123360 | - | ABC2_membrane |
| pfam | Rep_3277_c_3 | Rep_3277_c_3_117 | 123367 | 124203 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | Rep_3277_c_3 | Rep_3277_c_3_118 | 124200 | 125153 | - | GT2 |
Gene ID: Rep_3277_c_3_113
Type: CAZyme
Location: 116730 - 120080 (-)
Type: CAZyme
Location: 116730 - 120080 (-)
Gene ID: Rep_3277_c_3_114
Type: CAZyme
Location: 120098 - 121189 (-)
Type: CAZyme
Location: 120098 - 121189 (-)
Gene ID: Rep_3277_c_3_115
Type: TC
Location: 121186 - 121911 (-)
Type: TC
Location: 121186 - 121911 (-)
Gene ID: Rep_3277_c_3_116
Type: pfam
Location: 121921 - 123360 (-)
Type: pfam
Location: 121921 - 123360 (-)
Gene ID: Rep_3277_c_3_117
Type: pfam
Location: 123367 - 124203 (-)
Type: pfam
Location: 123367 - 124203 (-)
Gene ID: Rep_3277_c_3_118
Type: CAZyme
Location: 124200 - 125153 (-)
Type: CAZyme
Location: 124200 - 125153 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Intestinimonas
Species
Intestinimonas butyriciproducens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3277_c_3_117 | vegetarian > vegan | 2.14370 | 0.01057 |