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Cluster: Rep_3277_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3277_c_2 Rep_3277_c_2_331 341967 343829 + 1.A.33.1.4
sulfatase Rep_3277_c_2 Rep_3277_c_2_332 343958 345118 + S1_7
CAZyme Rep_3277_c_2 Rep_3277_c_2_333 345280 347538 + GT39
Gene ID: Rep_3277_c_2_331
Type: TC
Location: 341967 - 343829 (+)
Gene ID: Rep_3277_c_2_332
Type: sulfatase
Location: 343958 - 345118 (+)
Gene ID: Rep_3277_c_2_333
Type: CAZyme
Location: 345280 - 347538 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3277_c_2_333 vegetarian > vegan 1.43119 0.01057

🧭 Explore Read Mapping of CGC

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