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Cluster: Rep_3277_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3277_c_16 Rep_3277_c_16_10 10624 11916 - 2.A.40.1.1
pfam Rep_3277_c_16 Rep_3277_c_16_11 12127 13386 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
TC Rep_3277_c_16 Rep_3277_c_16_12 13661 15229 - 2.A.14.1.1
pfam Rep_3277_c_16 Rep_3277_c_16_13 15572 16840 + Lar_N | LarA_C
CAZyme Rep_3277_c_16 Rep_3277_c_16_14 16890 18311 + AA7
Gene ID: Rep_3277_c_16_10
Type: TC
Location: 10624 - 11916 (-)
Gene ID: Rep_3277_c_16_11
Type: pfam
Location: 12127 - 13386 (+)
Gene ID: Rep_3277_c_16_12
Type: TC
Location: 13661 - 15229 (-)
Gene ID: Rep_3277_c_16_13
Type: pfam
Location: 15572 - 16840 (+)
Gene ID: Rep_3277_c_16_14
Type: CAZyme
Location: 16890 - 18311 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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