dbCAN Logo

Cluster: Rep_3277_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3277_c_12 Rep_3277_c_12_59 50854 51447 + 2.A.115.2.14
TC Rep_3277_c_12 Rep_3277_c_12_60 51471 52817 + 2.A.66.1.32
CAZyme Rep_3277_c_12 Rep_3277_c_12_61 52859 53854 - CBM50 | GH25
pfam Rep_3277_c_12 Rep_3277_c_12_62 53993 55204 + Iso_dh
TC Rep_3277_c_12 Rep_3277_c_12_63 55391 56974 + 1.A.13.2.3
pfam Rep_3277_c_12 Rep_3277_c_12_64 57030 57626 + Rubrerythrin | RUBY_RBDX
TC Rep_3277_c_12 Rep_3277_c_12_65 57699 58598 - 3.D.6.1.3
TC Rep_3277_c_12 Rep_3277_c_12_66 58617 59210 - 3.D.6.1.2
TC Rep_3277_c_12 Rep_3277_c_12_67 59210 59854 - 3.D.6.1.2
TC Rep_3277_c_12 Rep_3277_c_12_68 59869 60423 - 3.D.6.1.3
TC Rep_3277_c_12 Rep_3277_c_12_69 60420 61457 - 3.D.6.1.2
TC Rep_3277_c_12 Rep_3277_c_12_70 61454 62797 - 3.D.6.1.2
Gene ID: Rep_3277_c_12_59
Type: TC
Location: 50854 - 51447 (+)
Gene ID: Rep_3277_c_12_60
Type: TC
Location: 51471 - 52817 (+)
Gene ID: Rep_3277_c_12_61
Type: CAZyme
Location: 52859 - 53854 (-)
Gene ID: Rep_3277_c_12_62
Type: pfam
Location: 53993 - 55204 (+)
Gene ID: Rep_3277_c_12_63
Type: TC
Location: 55391 - 56974 (+)
Gene ID: Rep_3277_c_12_64
Type: pfam
Location: 57030 - 57626 (+)
Gene ID: Rep_3277_c_12_65
Type: TC
Location: 57699 - 58598 (-)
Gene ID: Rep_3277_c_12_66
Type: TC
Location: 58617 - 59210 (-)
Gene ID: Rep_3277_c_12_67
Type: TC
Location: 59210 - 59854 (-)
Gene ID: Rep_3277_c_12_68
Type: TC
Location: 59869 - 60423 (-)
Gene ID: Rep_3277_c_12_69
Type: TC
Location: 60420 - 61457 (-)
Gene ID: Rep_3277_c_12_70
Type: TC
Location: 61454 - 62797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3277_c_12_59 vegetarian > vegan 2.00505 0.01057
Rep_3277_c_12_69 vegetarian > vegan 1.05245 0.01057

🧭 Explore Read Mapping of CGC

← Back to Cluster List