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Cluster: Rep_3277_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3277_c_6 Rep_3277_c_6_115 122261 123292 - GH179
TC Rep_3277_c_6 Rep_3277_c_6_116 123335 124171 - 3.A.1.1.44
TC Rep_3277_c_6 Rep_3277_c_6_117 124168 125064 - 3.A.1.1.7
Gene ID: Rep_3277_c_6_115
Type: CAZyme
Location: 122261 - 123292 (-)
Gene ID: Rep_3277_c_6_116
Type: TC
Location: 123335 - 124171 (-)
Gene ID: Rep_3277_c_6_117
Type: TC
Location: 124168 - 125064 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3277_c_6_116 vegetarian > vegan 1.57052 0.01057

🧭 Explore Read Mapping of CGC

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