Cluster: Rep_3277_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3277
- CGC Family ID: CGCFAM_00799
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3277_c_6 | Rep_3277_c_6_24 | 22485 | 23426 | - | CE7 |
| TF | Rep_3277_c_6 | Rep_3277_c_6_25 | 23564 | 24442 | + | HTH_AraC | HTH_AraC |
| TC | Rep_3277_c_6 | Rep_3277_c_6_26 | 24585 | 25964 | + | 3.A.1.1.17 |
| TC | Rep_3277_c_6 | Rep_3277_c_6_27 | 26052 | 26945 | + | 3.A.1.1.44 |
| TC | Rep_3277_c_6 | Rep_3277_c_6_28 | 26945 | 27790 | + | 3.A.1.1.41 |
| pfam | Rep_3277_c_6 | Rep_3277_c_6_29 | 27819 | 28925 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | Rep_3277_c_6 | Rep_3277_c_6_30 | 28986 | 31910 | + | CBM40 | GH33 |
Gene ID: Rep_3277_c_6_24
Type: CAZyme
Location: 22485 - 23426 (-)
Type: CAZyme
Location: 22485 - 23426 (-)
Gene ID: Rep_3277_c_6_25
Type: TF
Location: 23564 - 24442 (+)
Type: TF
Location: 23564 - 24442 (+)
Gene ID: Rep_3277_c_6_26
Type: TC
Location: 24585 - 25964 (+)
Type: TC
Location: 24585 - 25964 (+)
Gene ID: Rep_3277_c_6_27
Type: TC
Location: 26052 - 26945 (+)
Type: TC
Location: 26052 - 26945 (+)
Gene ID: Rep_3277_c_6_28
Type: TC
Location: 26945 - 27790 (+)
Type: TC
Location: 26945 - 27790 (+)
Gene ID: Rep_3277_c_6_29
Type: pfam
Location: 27819 - 28925 (+)
Type: pfam
Location: 27819 - 28925 (+)
Gene ID: Rep_3277_c_6_30
Type: CAZyme
Location: 28986 - 31910 (+)
Type: CAZyme
Location: 28986 - 31910 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Intestinimonas
Species
Intestinimonas butyriciproducens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.