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Cluster: Rep_3277_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3277_c_5 Rep_3277_c_5_125 128647 129375 - GT26
pfam Rep_3277_c_5 Rep_3277_c_5_126 129716 130744 + ABC_sub_bind
TC Rep_3277_c_5 Rep_3277_c_5_127 130853 131821 + 3.A.1.34.1
TC Rep_3277_c_5 Rep_3277_c_5_128 131814 132608 + 3.A.1.34.1
Gene ID: Rep_3277_c_5_125
Type: CAZyme
Location: 128647 - 129375 (-)
Gene ID: Rep_3277_c_5_126
Type: pfam
Location: 129716 - 130744 (+)
Gene ID: Rep_3277_c_5_127
Type: TC
Location: 130853 - 131821 (+)
Gene ID: Rep_3277_c_5_128
Type: TC
Location: 131814 - 132608 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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