Cluster: Rep_3271_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3271_c_12 | Rep_3271_c_12_15 | 17565 | 18899 | - | GH30_1 |
| CAZyme | Rep_3271_c_12 | Rep_3271_c_12_16 | 18896 | 20257 | - | GH30_2 |
| TC | Rep_3271_c_12 | Rep_3271_c_12_17 | 20267 | 21094 | - | 3.A.1.1.34 |
| TC | Rep_3271_c_12 | Rep_3271_c_12_18 | 21087 | 21995 | - | 3.A.1.1.4 |
Gene ID: Rep_3271_c_12_15
Type: CAZyme
Location: 17565 - 18899 (-)
Type: CAZyme
Location: 17565 - 18899 (-)
Gene ID: Rep_3271_c_12_16
Type: CAZyme
Location: 18896 - 20257 (-)
Type: CAZyme
Location: 18896 - 20257 (-)
Gene ID: Rep_3271_c_12_17
Type: TC
Location: 20267 - 21094 (-)
Type: TC
Location: 20267 - 21094 (-)
Gene ID: Rep_3271_c_12_18
Type: TC
Location: 21087 - 21995 (-)
Type: TC
Location: 21087 - 21995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.