Cluster: Rep_3271_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3271_c_106 | Rep_3271_c_106_1 | 3 | 431 | + | 1.A.33.1.4 |
| pfam | Rep_3271_c_106 | Rep_3271_c_106_2 | 571 | 1734 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| CAZyme | Rep_3271_c_106 | Rep_3271_c_106_3 | 1939 | 4113 | + | GT39 |
Gene ID: Rep_3271_c_106_1
Type: TC
Location: 3 - 431 (+)
Type: TC
Location: 3 - 431 (+)
Gene ID: Rep_3271_c_106_2
Type: pfam
Location: 571 - 1734 (+)
Type: pfam
Location: 571 - 1734 (+)
Gene ID: Rep_3271_c_106_3
Type: CAZyme
Location: 1939 - 4113 (+)
Type: CAZyme
Location: 1939 - 4113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.