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Cluster: Rep_3271_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3271_c_86 Rep_3271_c_86_1 4 990 - 3.A.1.2.12
pfam Rep_3271_c_86 Rep_3271_c_86_2 983 2092 - BPD_transp_2
TC Rep_3271_c_86 Rep_3271_c_86_3 2089 3714 - 3.A.1.2.12
TC Rep_3271_c_86 Rep_3271_c_86_4 4490 5743 - 3.A.1.2.17
STP Rep_3271_c_86 Rep_3271_c_86_5 6226 6798 - Pribosyltran
NULL(UNKNOWN) Rep_3271_c_86 Rep_3271_c_86_6 7100 7552 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3271_c_86 Rep_3271_c_86_7 7626 9290 + GH18
pfam Rep_3271_c_86 Rep_3271_c_86_8 9354 10223 + YitT_membrane | DUF2179
TC Rep_3271_c_86 Rep_3271_c_86_9 10432 11133 + 3.A.1.122.7
Gene ID: Rep_3271_c_86_1
Type: TC
Location: 4 - 990 (-)
Gene ID: Rep_3271_c_86_2
Type: pfam
Location: 983 - 2092 (-)
Gene ID: Rep_3271_c_86_3
Type: TC
Location: 2089 - 3714 (-)
Gene ID: Rep_3271_c_86_4
Type: TC
Location: 4490 - 5743 (-)
Gene ID: Rep_3271_c_86_5
Type: STP
Location: 6226 - 6798 (-)
Gene ID: Rep_3271_c_86_6
Type:
Location: 7100 - 7552 (+)
Gene ID: Rep_3271_c_86_7
Type: CAZyme
Location: 7626 - 9290 (+)
Gene ID: Rep_3271_c_86_8
Type: pfam
Location: 9354 - 10223 (+)
Gene ID: Rep_3271_c_86_9
Type: TC
Location: 10432 - 11133 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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