Cluster: Rep_3271_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3271_c_79 | Rep_3271_c_79_5 | 4214 | 5503 | - | GT76 |
| pfam | Rep_3271_c_79 | Rep_3271_c_79_6 | 5505 | 6428 | - | Formyl_trans_N | Formyl_trans_C |
| pfam | Rep_3271_c_79 | Rep_3271_c_79_7 | 6431 | 6931 | - | Pep_deformylase |
| TC | Rep_3271_c_79 | Rep_3271_c_79_8 | 7092 | 9566 | - | 3.A.11.3.1 |
Gene ID: Rep_3271_c_79_5
Type: CAZyme
Location: 4214 - 5503 (-)
Type: CAZyme
Location: 4214 - 5503 (-)
Gene ID: Rep_3271_c_79_6
Type: pfam
Location: 5505 - 6428 (-)
Type: pfam
Location: 5505 - 6428 (-)
Gene ID: Rep_3271_c_79_7
Type: pfam
Location: 6431 - 6931 (-)
Type: pfam
Location: 6431 - 6931 (-)
Gene ID: Rep_3271_c_79_8
Type: TC
Location: 7092 - 9566 (-)
Type: TC
Location: 7092 - 9566 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.