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Cluster: Rep_3271_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3271_c_70 Rep_3271_c_70_1 116 5467 + GH13_28
NULL(UNKNOWN) Rep_3271_c_70 Rep_3271_c_70_2 5962 6087 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3271_c_70 Rep_3271_c_70_3 6590 8320 - 3.A.1.21.1
TC Rep_3271_c_70 Rep_3271_c_70_4 8313 10088 - 3.A.1.21.1
TC Rep_3271_c_70 Rep_3271_c_70_5 10085 11569 - 3.A.1.31.2
TC Rep_3271_c_70 Rep_3271_c_70_6 11579 12316 - 3.A.1.31.2
TC Rep_3271_c_70 Rep_3271_c_70_7 12316 12897 - 3.A.1.31.2
Gene ID: Rep_3271_c_70_1
Type: CAZyme
Location: 116 - 5467 (+)
Gene ID: Rep_3271_c_70_2
Type:
Location: 5962 - 6087 (-)
Gene ID: Rep_3271_c_70_3
Type: TC
Location: 6590 - 8320 (-)
Gene ID: Rep_3271_c_70_4
Type: TC
Location: 8313 - 10088 (-)
Gene ID: Rep_3271_c_70_5
Type: TC
Location: 10085 - 11569 (-)
Gene ID: Rep_3271_c_70_6
Type: TC
Location: 11579 - 12316 (-)
Gene ID: Rep_3271_c_70_7
Type: TC
Location: 12316 - 12897 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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