Cluster: Rep_3271_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- CGC Family ID: CGCFAM_00965
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3271_c_55 | Rep_3271_c_55_5 | 3322 | 4602 | + | 2.A.39.1.1 |
| pfam | Rep_3271_c_55 | Rep_3271_c_55_6 | 4673 | 5509 | + | CN_hydrolase |
| NULL(UNKNOWN) | Rep_3271_c_55 | Rep_3271_c_55_7 | 5677 | 6000 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3271_c_55 | Rep_3271_c_55_8 | 6004 | 8847 | - | GH3 |
Gene ID: Rep_3271_c_55_5
Type: TC
Location: 3322 - 4602 (+)
Type: TC
Location: 3322 - 4602 (+)
Gene ID: Rep_3271_c_55_6
Type: pfam
Location: 4673 - 5509 (+)
Type: pfam
Location: 4673 - 5509 (+)
Gene ID: Rep_3271_c_55_7
Type:
Location: 5677 - 6000 (-)
Type:
Location: 5677 - 6000 (-)
Gene ID: Rep_3271_c_55_8
Type: CAZyme
Location: 6004 - 8847 (-)
Type: CAZyme
Location: 6004 - 8847 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.