Cluster: Rep_3271_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3271_c_39 | Rep_3271_c_39_20 | 19028 | 19822 | - | 3.A.1.34.1 |
| TC | Rep_3271_c_39 | Rep_3271_c_39_21 | 19815 | 20738 | - | 3.A.1.34.1 |
| pfam | Rep_3271_c_39 | Rep_3271_c_39_22 | 21003 | 22058 | - | ABC_sub_bind |
| CAZyme | Rep_3271_c_39 | Rep_3271_c_39_23 | 22364 | 23092 | + | GT26 |
Gene ID: Rep_3271_c_39_20
Type: TC
Location: 19028 - 19822 (-)
Type: TC
Location: 19028 - 19822 (-)
Gene ID: Rep_3271_c_39_21
Type: TC
Location: 19815 - 20738 (-)
Type: TC
Location: 19815 - 20738 (-)
Gene ID: Rep_3271_c_39_22
Type: pfam
Location: 21003 - 22058 (-)
Type: pfam
Location: 21003 - 22058 (-)
Gene ID: Rep_3271_c_39_23
Type: CAZyme
Location: 22364 - 23092 (+)
Type: CAZyme
Location: 22364 - 23092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.