Cluster: Rep_3271_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- CGC Family ID: CGCFAM_00566
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3271_c_2 | Rep_3271_c_2_70 | 84589 | 85419 | + | 3.A.1.3.15 |
| TC | Rep_3271_c_2 | Rep_3271_c_2_71 | 85501 | 86223 | + | 3.A.1.3.14 |
| TC | Rep_3271_c_2 | Rep_3271_c_2_72 | 86235 | 87020 | + | 3.A.1.3.14 |
| sulfatase | Rep_3271_c_2 | Rep_3271_c_2_73 | 87194 | 87778 | + | S1_4 |
| pfam | Rep_3271_c_2 | Rep_3271_c_2_74 | 87904 | 89073 | + | FAD_binding_2 | DAO | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | Rep_3271_c_2 | Rep_3271_c_2_75 | 89089 | 90117 | + | GT2 |
Gene ID: Rep_3271_c_2_70
Type: TC
Location: 84589 - 85419 (+)
Type: TC
Location: 84589 - 85419 (+)
Gene ID: Rep_3271_c_2_71
Type: TC
Location: 85501 - 86223 (+)
Type: TC
Location: 85501 - 86223 (+)
Gene ID: Rep_3271_c_2_72
Type: TC
Location: 86235 - 87020 (+)
Type: TC
Location: 86235 - 87020 (+)
Gene ID: Rep_3271_c_2_73
Type: sulfatase
Location: 87194 - 87778 (+)
Type: sulfatase
Location: 87194 - 87778 (+)
Gene ID: Rep_3271_c_2_74
Type: pfam
Location: 87904 - 89073 (+)
Type: pfam
Location: 87904 - 89073 (+)
Gene ID: Rep_3271_c_2_75
Type: CAZyme
Location: 89089 - 90117 (+)
Type: CAZyme
Location: 89089 - 90117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.