Cluster: Rep_3271_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- CGC Family ID: CGCFAM_00038
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3271_c_34 | Rep_3271_c_34_9 | 13368 | 14471 | + | GT4 |
| pfam | Rep_3271_c_34 | Rep_3271_c_34_10 | 14521 | 16095 | + | Wzy_C |
| TC | Rep_3271_c_34 | Rep_3271_c_34_11 | 16191 | 16763 | - | 2.A.51.1.6 |
Gene ID: Rep_3271_c_34_9
Type: CAZyme
Location: 13368 - 14471 (+)
Type: CAZyme
Location: 13368 - 14471 (+)
Gene ID: Rep_3271_c_34_10
Type: pfam
Location: 14521 - 16095 (+)
Type: pfam
Location: 14521 - 16095 (+)
Gene ID: Rep_3271_c_34_11
Type: TC
Location: 16191 - 16763 (-)
Type: TC
Location: 16191 - 16763 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.