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Cluster: Rep_3271_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3271_c_30 Rep_3271_c_30_16 17651 19240 + GH13_44
pfam Rep_3271_c_30 Rep_3271_c_30_17 19243 20619 + FAD_binding_2 | FAD_oxidored | NAD_binding_8
STP Rep_3271_c_30 Rep_3271_c_30_18 20654 22111 + SBP_bac_1
TC Rep_3271_c_30 Rep_3271_c_30_19 22195 23076 + 3.A.1.1.4
TC Rep_3271_c_30 Rep_3271_c_30_20 23103 23936 + 3.A.1.1.34
pfam Rep_3271_c_30 Rep_3271_c_30_21 23944 24636 + Lipase_GDSL | Lipase_GDSL_2
TC Rep_3271_c_30 Rep_3271_c_30_22 24647 25324 + 9.B.28.1.8
Gene ID: Rep_3271_c_30_16
Type: CAZyme
Location: 17651 - 19240 (+)
Gene ID: Rep_3271_c_30_17
Type: pfam
Location: 19243 - 20619 (+)
Gene ID: Rep_3271_c_30_18
Type: STP
Location: 20654 - 22111 (+)
Gene ID: Rep_3271_c_30_19
Type: TC
Location: 22195 - 23076 (+)
Gene ID: Rep_3271_c_30_20
Type: TC
Location: 23103 - 23936 (+)
Gene ID: Rep_3271_c_30_21
Type: pfam
Location: 23944 - 24636 (+)
Gene ID: Rep_3271_c_30_22
Type: TC
Location: 24647 - 25324 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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