dbCAN Logo

Cluster: Rep_3271_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3271_c_21 Rep_3271_c_21_2 500 9733 - GH171 | GH171
TF Rep_3271_c_21 Rep_3271_c_21_3 9915 10787 - HTH_6
TC Rep_3271_c_21 Rep_3271_c_21_4 10814 12433 - 8.A.7.1.1
STP Rep_3271_c_21 Rep_3271_c_21_5 12450 12707 - PTS-HPr
TC Rep_3271_c_21 Rep_3271_c_21_6 12727 13251 - 4.A.1.1.1
STP Rep_3271_c_21 Rep_3271_c_21_7 13738 14634 + SIS
TC Rep_3271_c_21 Rep_3271_c_21_8 14753 16177 + 4.A.1.2.7
CAZyme Rep_3271_c_21 Rep_3271_c_21_9 16170 17216 + GH170
Gene ID: Rep_3271_c_21_2
Type: CAZyme
Location: 500 - 9733 (-)
Gene ID: Rep_3271_c_21_3
Type: TF
Location: 9915 - 10787 (-)
Gene ID: Rep_3271_c_21_4
Type: TC
Location: 10814 - 12433 (-)
Gene ID: Rep_3271_c_21_5
Type: STP
Location: 12450 - 12707 (-)
Gene ID: Rep_3271_c_21_6
Type: TC
Location: 12727 - 13251 (-)
Gene ID: Rep_3271_c_21_7
Type: STP
Location: 13738 - 14634 (+)
Gene ID: Rep_3271_c_21_8
Type: TC
Location: 14753 - 16177 (+)
Gene ID: Rep_3271_c_21_9
Type: CAZyme
Location: 16170 - 17216 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List