Cluster: Rep_3271_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- CGC Family ID: CGCFAM_10292
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3271_c_14 | Rep_3271_c_14_48 | 51111 | 53852 | - | GH3 |
| TC | Rep_3271_c_14 | Rep_3271_c_14_49 | 53893 | 54825 | - | 3.A.1.2.18 |
| TC | Rep_3271_c_14 | Rep_3271_c_14_50 | 54830 | 55948 | - | 3.A.1.2.17 |
| TC | Rep_3271_c_14 | Rep_3271_c_14_51 | 55941 | 57491 | - | 3.A.1.2.17 |
Gene ID: Rep_3271_c_14_48
Type: CAZyme
Location: 51111 - 53852 (-)
Type: CAZyme
Location: 51111 - 53852 (-)
Gene ID: Rep_3271_c_14_49
Type: TC
Location: 53893 - 54825 (-)
Type: TC
Location: 53893 - 54825 (-)
Gene ID: Rep_3271_c_14_50
Type: TC
Location: 54830 - 55948 (-)
Type: TC
Location: 54830 - 55948 (-)
Gene ID: Rep_3271_c_14_51
Type: TC
Location: 55941 - 57491 (-)
Type: TC
Location: 55941 - 57491 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.