Cluster: Rep_3271_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3271_c_13 | Rep_3271_c_13_27 | 40576 | 41805 | - | 9.B.141.1.1 |
| sulfatase | Rep_3271_c_13 | Rep_3271_c_13_28 | 41911 | 50292 | - | S1_23 |
| CAZyme | Rep_3271_c_13 | Rep_3271_c_13_29 | 50894 | 53857 | - | GH3 |
| pfam | Rep_3271_c_13 | Rep_3271_c_13_30 | 53869 | 55299 | - | He_PIG | He_PIG |
| CAZyme | Rep_3271_c_13 | Rep_3271_c_13_31 | 55389 | 58937 | - | GH3 |
Gene ID: Rep_3271_c_13_27
Type: TC
Location: 40576 - 41805 (-)
Type: TC
Location: 40576 - 41805 (-)
Gene ID: Rep_3271_c_13_28
Type: sulfatase
Location: 41911 - 50292 (-)
Type: sulfatase
Location: 41911 - 50292 (-)
Gene ID: Rep_3271_c_13_29
Type: CAZyme
Location: 50894 - 53857 (-)
Type: CAZyme
Location: 50894 - 53857 (-)
Gene ID: Rep_3271_c_13_30
Type: pfam
Location: 53869 - 55299 (-)
Type: pfam
Location: 53869 - 55299 (-)
Gene ID: Rep_3271_c_13_31
Type: CAZyme
Location: 55389 - 58937 (-)
Type: CAZyme
Location: 55389 - 58937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.