Cluster: Rep_3271_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3271_c_0 | Rep_3271_c_0_71 | 101592 | 113630 | - | CBM66 |
| NULL(UNKNOWN) | Rep_3271_c_0 | Rep_3271_c_0_72 | 113694 | 114326 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3271_c_0 | Rep_3271_c_0_73 | 114349 | 116487 | - | Hydantoinase_A | Hydant_A_N |
| TC | Rep_3271_c_0 | Rep_3271_c_0_74 | 116578 | 117861 | - | 2.A.11.2.2 |
Gene ID: Rep_3271_c_0_71
Type: CAZyme
Location: 101592 - 113630 (-)
Type: CAZyme
Location: 101592 - 113630 (-)
Gene ID: Rep_3271_c_0_72
Type:
Location: 113694 - 114326 (-)
Type:
Location: 113694 - 114326 (-)
Gene ID: Rep_3271_c_0_73
Type: pfam
Location: 114349 - 116487 (-)
Type: pfam
Location: 114349 - 116487 (-)
Gene ID: Rep_3271_c_0_74
Type: TC
Location: 116578 - 117861 (-)
Type: TC
Location: 116578 - 117861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Species
Pseudoflavonifractor faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.