Cluster: Rep_3268_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3268
- CGC Family ID: CGCFAM_00527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3268_c_37 | Rep_3268_c_37_3 | 2069 | 3097 | + | GT2 |
| TF | Rep_3268_c_37 | Rep_3268_c_37_4 | 3248 | 3673 | - | HTH_3 |
| TC | Rep_3268_c_37 | Rep_3268_c_37_5 | 3816 | 4490 | + | 9.B.106.3.3 |
Gene ID: Rep_3268_c_37_3
Type: CAZyme
Location: 2069 - 3097 (+)
Type: CAZyme
Location: 2069 - 3097 (+)
Gene ID: Rep_3268_c_37_4
Type: TF
Location: 3248 - 3673 (-)
Type: TF
Location: 3248 - 3673 (-)
Gene ID: Rep_3268_c_37_5
Type: TC
Location: 3816 - 4490 (+)
Type: TC
Location: 3816 - 4490 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM12998
Species
HGM12998 sp900756495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.