Cluster: Rep_3268_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3268
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3268_c_4 | Rep_3268_c_4_25 | 20198 | 20983 | + | 1.A.16.3.3 |
| CAZyme | Rep_3268_c_4 | Rep_3268_c_4_26 | 20999 | 28093 | - | GH94 | GT84 |
| STP | Rep_3268_c_4 | Rep_3268_c_4_27 | 28357 | 28725 | + | Sigma70_r4 |
| TC | Rep_3268_c_4 | Rep_3268_c_4_28 | 28728 | 30080 | + | 3.A.5.1.1 |
Gene ID: Rep_3268_c_4_25
Type: TC
Location: 20198 - 20983 (+)
Type: TC
Location: 20198 - 20983 (+)
Gene ID: Rep_3268_c_4_26
Type: CAZyme
Location: 20999 - 28093 (-)
Type: CAZyme
Location: 20999 - 28093 (-)
Gene ID: Rep_3268_c_4_27
Type: STP
Location: 28357 - 28725 (+)
Type: STP
Location: 28357 - 28725 (+)
Gene ID: Rep_3268_c_4_28
Type: TC
Location: 28728 - 30080 (+)
Type: TC
Location: 28728 - 30080 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM12998
Species
HGM12998 sp900756495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.