Cluster: Rep_3268_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3268
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3268_c_2 | Rep_3268_c_2_38 | 38540 | 39805 | + | CE1 |
| STP | Rep_3268_c_2 | Rep_3268_c_2_39 | 39842 | 41077 | + | HD |
| pfam | Rep_3268_c_2 | Rep_3268_c_2_40 | 41592 | 42596 | - | URO-D |
| TC | Rep_3268_c_2 | Rep_3268_c_2_41 | 43262 | 44764 | + | 3.A.1.2.26 |
| TC | Rep_3268_c_2 | Rep_3268_c_2_42 | 44761 | 45801 | + | 3.A.1.2.13 |
Gene ID: Rep_3268_c_2_38
Type: CAZyme
Location: 38540 - 39805 (+)
Type: CAZyme
Location: 38540 - 39805 (+)
Gene ID: Rep_3268_c_2_39
Type: STP
Location: 39842 - 41077 (+)
Type: STP
Location: 39842 - 41077 (+)
Gene ID: Rep_3268_c_2_40
Type: pfam
Location: 41592 - 42596 (-)
Type: pfam
Location: 41592 - 42596 (-)
Gene ID: Rep_3268_c_2_41
Type: TC
Location: 43262 - 44764 (+)
Type: TC
Location: 43262 - 44764 (+)
Gene ID: Rep_3268_c_2_42
Type: TC
Location: 44761 - 45801 (+)
Type: TC
Location: 44761 - 45801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM12998
Species
HGM12998 sp900756495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.